Jatropha Genome Database

JcCB0009521.40 (JcS_100436.90)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0009521
Scaffold:
JcS_100436 JcCA0283211(-) =JcCB0151131(-) =JcCA0205491(-) =JcCB0423721(-) =JcCB0533111(-) =JcCB0009521(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q2XPU7_RICCO 358 71.4 81.7 (tr|Q2XPU7) Lupeol synthase OS=Ricinus communis PE=2 SV=1
Arabidopsis_pep AT1G78955.1 309 62.1 74.2 | Symbols: CAMS1 | CAMS1 (Camelliol C synthase 1); beta-amyrin synthase | chr1:29689153-29694255 REVERSE
soybean_pep Glyma08g24160.2 325 65.1 76.3  
Medicago_pep IMGA|Medtr4g163370.1 316 63.2 72.8 Prenyltransferase/squalene oxidase chr04_pseudomolecule_IMGAG_V3 41405062-41412055 E EGN_Mt090430 20090702
grape_pep GSVIVT01029509001 335 67.9 77.5  
castor_bean_cds 29588.m000889 289 88.7 88.7 Cycloartenol synthase, putative
castor_bean_pep 29588.m000889 357 71.4 81.7 Cycloartenol synthase, putative
JAT_13201ests gi|268518239|gb|FM888513.1|FM888513 121 88.0 88.0 FM888513 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001940, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0009521.40 length: 231 aa.
IPR001330 Prenyltransferase/squalene oxidase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00432 Prenyltrans 3.7e-06 151-188
198-221
IPR002365 Terpene synthase, conserved site
Molecular Function GO:0016866 intramolecular transferase activity    
PatternScan PS01074 TERPENE_SYNTHASES NA 162-176
no_ID  
Gene3D G3DSA:1.50.10.20 no description 6.5e-65 3-226
superfamily SSF81853 Family 3.2e-55 22-231