| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RR75_RICCO | 339 | 93.1 | 97.1 | (tr|B9RR75) Polygalacturonase, putative OS=Ricinus communis GN=RCOM_0710990 PE=4 SV=1 |
| Arabidopsis_pep | AT3G42950.1 | 296 | 78.6 | 92.5 | | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr3:15015383-15017800 FORWARD |
| soybean_pep | Glyma17g05550.1 | 320 | 86.8 | 94.3 | |
| Medicago_pep | IMGA|Medtr8g132740.1 | 317 | 85.6 | 93.7 | Glycoside hydrolase, family 28 chr08_pseudomolecule_IMGAG_V3 31432757-31436207 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01015044001 | 330 | 89.7 | 96.6 | |
| castor_bean_cds | 29739.m003728 | 581 | 89.3 | 89.3 | polygalacturonase, putative |
| castor_bean_pep | 29739.m003728 | 339 | 93.1 | 97.1 | polygalacturonase, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0008691.10 | length: 174 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 1.5e-18 | 2-126 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | no description | 6.5e+03 | 13-34 42-63 103-124 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 1.3e-29 | 2-153 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 4.7e-28 | 2-118 |