Jatropha Genome Database

JcCB0008631.10 (JcS_104263.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0008631
Scaffold:
JcS_104263 JcCB0229021(-) =JcCB0008631(+) =JcCD0075272(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A7XZV0_9ROSI 814 90.1 90.1 (tr|A7XZV0) Chloroplast omega-3 fatty acid desaturase OS=Jatropha curcas PE=2 SV=1
Arabidopsis_pep AT5G05580.1 637 68.9 78.0 | Symbols: FAD8 | FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | chr5:1664331-1666345 FORWARD
soybean_pep Glyma01g29630.2 670 73.0 80.1  
Medicago_pep IMGA|Medtr4g013060.1 662 73.8 80.3 Fatty acid desaturase chr04_pseudomolecule_IMGAG_V3 2464310-2468599 E EGN_Mt090430 20090702
grape_pep GSVIVT01011171001 684 75.6 83.4  
castor_bean_cds 28176.m000273 1021 87.3 87.3 Omega-3 fatty acid desaturase, chloroplast precursor, putative
castor_bean_pep 28176.m000273 703 77.5 82.8 Omega-3 fatty acid desaturase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03837 2113 99.9 99.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0008631.10 length: 446 aa.
IPR005804 Fatty acid desaturase, type 1
method AccNumber shortName E-value location
Biological Process GO:0006629 lipid metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF00487 FA_desaturase 2.9e-34 143-398
IPR021863 Protein of unknown function DUF3474
HMMPfam PF11960 DUF3474 5.8e-57 1-136
no_ID  
Seg seg seg NA 68-90
128-147