Jatropha Genome Database

JcCB0008031.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0008031
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SHK4_RICCO 756 79.0 85.8 (tr|B9SHK4) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122510 PE=4 SV=1
Arabidopsis_pep AT1G08550.2 582 73.0 82.9 | Symbols: NPQ1, AVDE1 | NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1); violaxanthin de-epoxidase | chr1:2707462-2709387 FORWARD
soybean_pep Glyma19g44010.1 615 66.5 76.5  
Medicago_pep IMGA|Medtr7g143290.1 584 66.7 77.9 Lipocalin-related protein and Bos/Can/Equ allergen; Calycin chr07_pseudomolecule_IMGAG_V3 34369728-34366079 E EGN_Mt090430 20090702
grape_pep GSVIVT01026405001 667 73.8 83.8  
castor_bean_cds 29950.m001179 1142 85.9 85.9 conserved hypothetical protein
castor_bean_pep 29950.m001179 756 79.0 85.8 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0008031.20 length: 481 aa.
IPR010788 Violaxanthin de-epoxidase
method AccNumber shortName E-value location
Cellular Component GO:0009507 chloroplast    
Molecular Function GO:0046422 violaxanthin de-epoxidase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF07137 VDE 3.5e-125 198-395
IPR011038 Calycin-like
superfamily SSF50814 Lipocalins 1.2e-25 158-395
IPR012674 Calycin
Molecular Function GO:0005488 binding    
Gene3D G3DSA:2.40.128.20 no description 0.00061 227-383
IPR022272 Lipocalin conserved site
PatternScan PS00213 LIPOCALIN NA 232-243
no_ID  
Seg seg seg NA 156-170