Jatropha Genome Database

JcCB0006311.20  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0006311
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SED7_RICCO 585 85.1 93.5 (tr|B9SED7) Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0962260 PE=4 SV=1
Arabidopsis_pep AT4G09750.1 568 81.6 91.9 | Symbols: | short-chain dehydrogenase/reductase (SDR) family protein | chr4:6146770-6148698 FORWARD
soybean_pep Glyma02g08610.1 556 80.3 90.6  
Medicago_pep IMGA|Medtr6g035840.1 530 72.6 83.7 Short-chain dehydrogenase/reductase SDR chr06_pseudomolecule_IMGAG_V3 7718951-7724951 E EGN_Mt090430 20090702
grape_pep GSVIVT01001427001 566 82.3 91.0  
castor_bean_cds 29863.m001112 936 88.0 88.0 short-chain dehydrogenase, putative
castor_bean_pep 29863.m001112 585 85.1 93.5 short-chain dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0006311.20 length: 322 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
HMMPanther PTHR19410 SHORT-CHAIN 1.4e-153 24-288
HMMPfam PF00106 adh_short 1.2e-21 45-183
IPR002347 Glucose/ribitol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00081 GDHRDH 2.7e-11 45-62
121-132
226-243
254-274
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 3.8e-45 41-248
superfamily SSF51735 NAD(P)-binding 1.5e-49 35-288
no_ID  
HMMPanther PTHR19410:SF105SHORT CHAIN 1.4e-153 24-288