Jatropha Genome Database

JcCB0005311.20 (JcS_101073.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0005311
Scaffold:
JcS_101073 JcCB0174321(-) =JcCB0232511(+) =JcCB0005311(+) =JcPR04HFAOL(+) =JcCD0099951(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SRK8_RICCO 395 90.5 96.5 (tr|B9SRK8) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_0840110 PE=4 SV=1
Arabidopsis_pep AT3G53090.2 377 69.7 77.4 | Symbols: UPL7 | UPL7; ubiquitin-protein ligase | chr3:19679273-19684453 FORWARD
soybean_pep Glyma19g37310.4 387 72.0 78.9  
Medicago_pep IMGA|Medtr2g037340.1 179 37.3 53.1 IQ calmodulin-binding region; HECT chr02_pseudomolecule_IMGAG_V3 10124038-10100639 E EGN_Mt090430 20090702
grape_pep GSVIVT01033734001 390 72.8 78.5  
castor_bean_cds 29815.m000491 733 90.9 90.9 ubiquitin-protein ligase, putative
castor_bean_pep 29815.m000491 395 90.5 96.5 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03209 617 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0005311.20 length: 261 aa.
IPR000569 HECT
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006464 protein modification process    
Molecular Function GO:0016881 acid-amino acid ligase activity    
HMMPfam PF00632 HECT 2.5e-05 6-194
223-261
HMMSmart SM00119 no description 1e-11 1-261
ProfileScan PS50237 HECT 47.267 1-261
superfamily SSF56204 Hect, 1.1e-06 3-194
224-255
no_ID  
HMMPanther PTHR11254 HECT 1.4e-93 1-253
HMMPanther PTHR11254:SF70 PROBABLE 1.4e-93 1-253