| JcS_200542 | JcPR02H5PJ9(+) =JcPR03AM69T(-) =JcCB0004891(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9GN36_POPTR | 227 | 52.8 | 66.3 | (tr|B9GN36) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816389 PE=4 SV=1 |
| Arabidopsis_pep | AT3G56770.1 | 90.9 | 36.5 | 55.4 | | Symbols: | basic helix-loop-helix (bHLH) family protein | chr3:21029202-21030618 REVERSE |
| soybean_pep | Glyma02g37720.1 | 158 | 51.2 | 60.0 | |
| Medicago_pep | IMGA|Medtr5g075080.1 | 154 | 42.5 | 55.6 | Helix-loop-helix DNA-binding chr05_pseudomolecule_IMGAG_V3 27271155-27270301 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009166001 | 172 | 51.3 | 60.4 | |
| castor_bean_cds | 29908.m006255 | 149 | 81.7 | 81.7 | DNA binding protein, putative |
| castor_bean_pep | 29908.m006255 | 213 | 56.6 | 65.6 | DNA binding protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0004891.20 | length: 244 aa. | |||
| IPR001092 | Helix-loop-helix DNA-binding domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0030528 | transcription regulator activity | ||
| Biological Process | GO:0045449 | regulation of transcription | ||
| HMMPfam | PF00010 | HLH | 1.3e-12 | 51-98 |
| HMMSmart | SM00353 | no description | 4.6e-13 | 55-104 |
| ProfileScan | PS50888 | HLH | 12.696 | 42-99 |
| IPR011598 | Helix-loop-helix DNA-binding | |||
| Cellular Component | GO:0005634 | nucleus | ||
| Molecular Function | GO:0030528 | transcription regulator activity | ||
| Biological Process | GO:0045449 | regulation of transcription | ||
| Gene3D | G3DSA:4.10.280.10 | no description | 2.7e-06 | 46-104 |
| superfamily | SSF47459 | HLH, | 5.4e-12 | 39-116 |
| no_ID | ||||
| HMMPanther | PTHR12565 | STEROL | 1.7e-07 | 53-99 |
| HMMPanther | PTHR12565:SF7 | CENTROMERE-BINDING | 1.7e-07 | 53-99 |
| Seg | seg | seg | NA | 69-82 186-207 |
| superfamily | SSF55021 | ACT-like | 8.3e-06 | 140-216 |