Jatropha Genome Database

JcCB0004861.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0004861
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BLN2_VITVI 219 56.6 62.6 (tr|A5BLN2) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004485 PE=3 SV=1
Arabidopsis_pep AT4G25000.1 159 46.6 58.5 | Symbols: ATAMY1, AMY1 | AMY1 (ALPHA-AMYLASE-LIKE); alpha-amylase | chr4:12852109-12853825 REVERSE
soybean_pep Glyma17g36090.1 184 48.5 58.6  
Medicago_pep IMGA|Medtr1g024370.1 173 45.5 55.6 Alpha amylase, catalytic subdomain; Alpha-amylase beta-sheet, C-terminal; chr01_pseudomolecule_IMGAG_V3 5777523-5780031 E EGN_Mt090430 20090702
grape_pep GSVIVT01031740001 218 56.6 62.6  
castor_bean_cds 30170.m013877 113 84.6 84.6 alpha-amylase, putative
castor_bean_pep 30170.m013877 201 53.0 57.6 alpha-amylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0004861.10 length: 330 aa.
IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
HMMSmart SM00642 no description 0.003 1-278
IPR012850 Alpha-amylase, C-terminal beta-sheet
Molecular Function GO:0004556 alpha-amylase activity    
Molecular Function GO:0005509 calcium ion binding    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF07821 Alpha-amyl_C2 1.1e-11 273-330
HMMSmart SM00810 no description 1.3e-14 273-330
IPR013780 Glycosyl hydrolase, family 13, all-beta
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:2.60.40.1180 no description 1.1e-10 277-330
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 1.7e-21 2-141
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 3.4e-22 1-143
no_ID  
HMMPanther PTHR10357 AMYLASE 3e-59 1-329
HMMPanther PTHR10357:SF9 ALPHA-AMYLASE 3e-59 1-329
superfamily SSF51011 Glycosyl 3.1e-11 277-330