Jatropha Genome Database

JcCB0004761.20 (JcS_101083.50)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0004761
Scaffold:
JcS_101083 JcCB0190921(-) =JcCB0084921(-) =JcCB0476701(-) =JcCB0126381(+) =JcCB0004761(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9C697_ARATH 199 34.2 54.9 (tr|Q9C697) Reverse transcriptase, putative; 16838-20266 OS=Arabidopsis thaliana GN=T6B12.3 PE=4 SV=1
Arabidopsis_pep AT4G29090.1 162 30.7 50.8 | Symbols: | reverse transcriptase, putative / RNA-dependent DNA polymerase, putative | chr4:14333528-14335255 FORWARD
soybean_pep Glyma14g16190.1 99.8 25.9 42.2  
Medicago_pep IMGA|Medtr8g024620.1 191 33.6 53.5 hypothetical protein chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E EGN_Mt090430 20090702
grape_pep GSVIVT01004252001 70.5 23.2 41.3  
castor_bean_cds --No_Hits--        
castor_bean_pep 30068.m002537 125 29.3 44.0 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0004761.20 length: 299 aa.
IPR015706 RNA-directed DNA polymerase (reverse transcriptase), related
method AccNumber shortName E-value location
HMMPanther PTHR19446 REVERSE 9e-53 1-298
no_ID  
HMMPanther PTHR19446:SF34 NON-LTR 9e-53 1-298