Jatropha Genome Database

JcCB0004411.10 (JcS_100186.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0004411
Scaffold:
JcS_100186 JcCB0787851(-) =JcCB0971801(-) =JcCA0255541(-) =JcCB0359051(+) =JcCB0004411(-) =JcCB0100521(+) =JcCB0894111(+) =JcCB0233861(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SGJ1_RICCO 666 80.2 84.1 (tr|B9SGJ1) Protein phosphatase 2c, putative OS=Ricinus communis GN=RCOM_0553290 PE=4 SV=1
Arabidopsis_pep AT5G66720.1 421 55.4 68.5 | Symbols: | 5-azacytidine resistance protein -related | chr5:26639015-26640545 REVERSE
soybean_pep Glyma17g36760.1 450 58.8 71.1  
Medicago_pep IMGA|Medtr5g019680.1 407 55.7 70.3 Stage II sporulation E chr05_pseudomolecule_IMGAG_V3 7366282-7363304 E EGN_Mt090430 20090702
grape_pep GSVIVT01019004001 464 70.6 79.4  
castor_bean_cds 29646.m001072 858 84.6 84.6 protein phosphatase 2c, putative
castor_bean_pep 29646.m001072 666 80.2 84.1 protein phosphatase 2c, putative
JAT_13201ests gi|268523700|gb|FM892233.1|FM892233 357 86.3 86.3 FM892233 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_002733, mRNA sequence
KJC_r1 KJC_c03318 1852 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0004411.10 length: 417 aa.
IPR001932 Protein phosphatase 2C-related
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.60.40.10 no description 2.9e-13 189-408
HMMSmart SM00331 no description 1.2e-07 171-411
HMMSmart SM00332 no description 6.8e-06 162-409
superfamily SSF81606 Protein 4.3e-26 151-411
IPR010822 Sporulation stage II, protein E C-terminal
Molecular Function GO:0004721 phosphoprotein phosphatase activity    
HMMPfam PF07228 SpoIIE 7.4e-12 200-409
no_ID  
HMMPanther PTHR12320 PROTEIN 4.8e-81 166-416
Seg seg seg NA 200-215