Jatropha Genome Database

JcCB0004221.20 (JcS_104796.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0004221
Scaffold:
JcS_104796 JcCB0004221(+) =JcCA0071981(+) =JcCA0147021(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SI03_RICCO 177 76.4 85.5 (tr|B9SI03) 60S acidic ribosomal protein P0, putative OS=Ricinus communis GN=RCOM_0611760 PE=3 SV=1
Arabidopsis_pep AT2G40010.1 160 70.0 80.9 | Symbols: | 60S acidic ribosomal protein P0 (RPP0A) | chr2:16708578-16710448 REVERSE
soybean_pep Glyma02g42260.2 154 67.3 80.0  
Medicago_pep IMGA|Medtr3g135890.1 164 70.0 82.7 Ribosomal protein L10; Ribosomal protein 60S chr03_pseudomolecule_IMGAG_V3 34138775-34136217 F EGN_Mt090430 20090702
grape_pep GSVIVT01032857001 100 50.0 56.4  
castor_bean_cds 29681.m001324 186 83.1 83.1 60S acidic ribosomal protein P0, putative
castor_bean_pep 29681.m001324 177 76.4 85.5 60S acidic ribosomal protein P0, putative
JAT_13201ests gi|237680672|gb|GO246884.1|GO246884 52.0 88.0 88.0 JcrME_RL0428 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c00296 52.0 88.0 88.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0004221.20 length: 115 aa.
IPR001790 Ribosomal protein L10
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Biological Process GO:0042254 ribosome biogenesis    
HMMPfam PF00466 Ribosomal_L10 1.7e-24 7-108
no_ID  
HMMPanther PTHR21141 60S 1.2e-50 6-110
Seg seg seg NA 81-92