Jatropha Genome Database

JcCB0003071.30 (JcS_104922.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0003071
Scaffold:
JcS_104922 JcCB0471061(+) =JcCB0003071(+) =JcCA0198981(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SVN4_RICCO 326 57.7 67.9 (tr|B9SVN4) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0794260 PE=4 SV=1
Arabidopsis_pep AT3G26350.1 194 47.5 64.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: pedicel, root, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1); Has 3161 Blast hits to 2320 proteins in 288 species: Archae - 6; Bacteria - 135; Metazoa - 1071; Fungi - 426; Plants - 961; Viruses - 219; Other Eukaryotes - 343 (source: NCBI BLink). | chr3:9653660-9654730 REVERSE
soybean_pep Glyma08g13920.1 234 55.8 72.1  
Medicago_pep IMGA|Medtr5g104320.1 146 37.0 55.0 Harpin-induced 1 chr05_pseudomolecule_IMGAG_V3 41827212-41826484 E EGN_Mt090430 20090702
grape_pep GSVIVT01014834001 62.0 32.9 53.2  
castor_bean_cds 29792.m000621 268 80.8 80.8 conserved hypothetical protein
castor_bean_pep 29792.m000621 326 57.7 67.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0003071.30 length: 398 aa.
IPR004864 Late embryogenesis abundant protein, type 2
method AccNumber shortName E-value location
HMMPfam PF03168 LEA_2 1.3e-06 280-373
no_ID  
Seg seg seg NA 26-37
228-244