Jatropha Genome Database

JcCB0001411.50 (JcS_103149.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0001411
Scaffold:
JcS_103149 JcCA0214811(-) =JcCB0001411(-) =JcCB0249401(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9STZ8_RICCO 218 81.5 90.3 (tr|B9STZ8) Ubiquitin-activating enzyme E1, putative OS=Ricinus communis GN=RCOM_0753070 PE=4 SV=1
Arabidopsis_pep AT5G55130.1 165 63.5 78.6 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase | chr5:22373374-22376028 REVERSE
soybean_pep Glyma02g46300.1 180 67.7 82.3  
Medicago_pep IMGA|Medtr5g101010.1 171 64.8 78.4 UBA/THIF-type NAD/FAD binding fold; Rhodanese-like chr05_pseudomolecule_IMGAG_V3 40405967-40401475 E EGN_Mt090430 20090702
grape_pep GSVIVT01037705001 186 69.6 84.0  
castor_bean_cds 29762.m000496 252 80.7 80.7 ubiquitin-activating enzyme E1, putative
castor_bean_pep 29762.m000496 218 81.5 90.3 ubiquitin-activating enzyme E1, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03918 601 89.7 89.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0001411.50 length: 194 aa.
IPR001763 Rhodanese-like
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.250.10 no description 5.5e-17 77-189
HMMPfam PF00581 Rhodanese 1.3e-12 81-185
HMMSmart SM00450 no description 1.7e-19 79-189
ProfileScan PS50206 RHODANESE_3 17.042 89-192
superfamily SSF52821 Rhodanese/Cell 2.1e-20 51-189
no_ID  
HMMPanther PTHR13253 FAMILY 6.2e-06 94-191