Jatropha Genome Database

JcCB0001411.40 (JcS_103149.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0001411
Scaffold:
JcS_103149 JcCA0214811(-) =JcCB0001411(-) =JcCB0249401(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7T2T6_VITVI 566 68.8 79.8 (tr|D7T2T6) Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032004001 PE=4 SV=1
Arabidopsis_pep AT5G42260.1 535 62.8 77.9 | Symbols: BGLU12 | BGLU12 (BETA GLUCOSIDASE 12); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr5:16898712-16900235 FORWARD
soybean_pep Glyma12g36870.1 540 65.8 78.9  
Medicago_pep IMGA|Medtr4g115640.1 402 51.8 65.5 Glycoside hydrolase, family 1 chr04_pseudomolecule_IMGAG_V3 26815143-26820786 E EGN_Mt090430 20090702
grape_pep GSVIVT01032004001 566 68.8 79.8  
castor_bean_cds 30226.m001987 272 81.5 81.5 beta-glucosidase, putative
castor_bean_pep 30226.m001978 518 60.2 76.4 beta-glucosidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0001411.40 length: 416 aa.
IPR001360 Glycoside hydrolase, family 1
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPanther PTHR10353 GLYCOSIDE 1.7e-237 34-416
HMMPfam PF00232 Glyco_hydro_1 6.8e-133 35-416
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 1.3e-137 14-416
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 6.5e-143 24-416
IPR018120 Glycoside hydrolase, family 1, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS00653 GLYCOSYL_HYDROL_F1_2 NA 42-56
no_ID  
HMMPanther PTHR10353:SF6 BETA-GLUCOSIDASE 1.7e-237 34-416
Seg seg seg NA 6-19
133-146