| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | Q58A75_GINBI | 112 | 91.7 | 95.0 | (tr|Q58A75) MADS-box transcription factor GbMADS8 OS=Ginkgo biloba GN=GbMADS8 PE=2 SV=1 |
| Arabidopsis_pep | AT2G45650.1 | 109 | 89.8 | 96.6 | | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor | chr2:18804453-18806291 FORWARD |
| soybean_pep | Glyma07g08890.1 | 111 | 91.5 | 96.6 | |
| Medicago_pep | IMGA|Medtr7g083420.1 | 108 | 88.3 | 96.7 | Transcription factor, MADS-box chr07_pseudomolecule_IMGAG_V3 17798888-17800934 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01018450001 | 111 | 90.0 | 96.7 | |
| castor_bean_cds | 30174.m008934 | 105 | 86.0 | 86.0 | mads box protein, putative |
| castor_bean_pep | 30174.m008934 | 109 | 89.8 | 96.6 | mads box protein, putative |
| JAT_13201ests | gi|262091321|gb|GT228748.1|GT228748 | 93.7 | 82.8 | 82.8 | JC313 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.E07.scf 5', mRNA sequence |
| KJC_r1 | --No_Hits-- |
| JcCB0001131.10 | length: 112 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 1.1e-30 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 1.2e-28 | 9-58 |
| HMMSmart | SM00432 | no description | 5.7e-40 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 31.497 | 1-61 |
| superfamily | SSF55455 | SRF-like | 1.5e-26 | 1-61 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 4.7e-43 | 10-60 |
| HMMPanther | PTHR11945:SF19 | MADS | 4.7e-43 | 10-60 |
| Seg | seg | seg | NA | 65-88 104-111 |