Jatropha Genome Database

JcCB0000571.10 (JcS_107805.30)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0000571
Scaffold:
JcS_107805 JcCA0043871(+) =JcCB0000571(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9ZRJ0_TOBAC 416 83.1 92.2 (tr|Q9ZRJ0) Retrotransposon Tto1 DNA OS=Nicotiana tabacum PE=4 SV=1
Arabidopsis_pep AT4G23160.1 117 36.2 58.2 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma06g18690.1 268 54.1 72.1  
Medicago_pep IMGA|Medtr5g048830.1 137 36.9 55.6 Polynucleotidyl transferase, Ribonuclease H fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H EGN_Mt090430 20090702
grape_pep GSVIVT01000641001 179 42.6 62.6  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests gi|268518200|gb|FM888474.1|FM888474 167 87.5 87.5 FM888474 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001895, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0000571.10 length: 244 aa.
IPR002156 Ribonuclease H
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004523 ribonuclease H activity    
HMMPfam PF00075 RnaseH 9.7e-05 80-177
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 9.6e-100 6-233
superfamily SSF56672 DNA/RNA 1e-07 15-187