Jatropha Genome Database

JcCA0317901.20 (JcS_102295.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317901
Scaffold:
JcS_102295 JcCB0402101(+) =JcCA0317901(+) =JcCA0298961(+) =JcPR02GC7KU(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RQ57_RICCO 1508 82.6 88.4 (tr|B9RQ57) Ubiquitin carboxyl-terminal hydrolase OS=Ricinus communis GN=RCOM_0955780 PE=3 SV=1
Arabidopsis_pep AT5G22030.1 1135 62.2 74.0 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8); ubiquitin thiolesterase/ ubiquitin-specific protease | chr5:7290155-7296344 REVERSE
soybean_pep Glyma12g31660.1 892 70.3 82.1  
Medicago_pep IMGA|Medtr7g105660.1 697 43.4 59.8 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; Ubiquitin carboxyl-terminal hydrolase, N-terminal region 2 chr07_pseudomolecule_IMGAG_V3 24271300-24260562 E EGN_Mt090430 20090702
grape_pep GSVIVT01037531001 828 68.3 78.5  
castor_bean_cds 29854.m001132 1758 87.4 87.4 Ubiquitin carboxyl-terminal hydrolase, putative
castor_bean_pep 29854.m001132 1508 82.6 88.4 Ubiquitin carboxyl-terminal hydrolase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c09066 182 82.5 82.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317901.20 length: 885 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 2.5e-86 284-879
ProfileScan PS50235 UCH_2_3 33.661 286-883
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 287-302
PatternScan PS00973 UCH_2_2 NA 825-842
no_ID  
HMMPanther PTHR10420 UBIQUITIN 1.5e-183 7-830
HMMPanther PTHR10420:SF72 UBIQUITIN 1.5e-183 7-830
Seg seg seg NA 260-274
281-294
superfamily SSF54001 Cysteine 1.5e-94 280-882