Jatropha Genome Database

JcCA0317741.30 (JcS_101129.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317741
Scaffold:
JcS_101129 JcCB0252381(+) =JcCA0152741(-) =JcCB0682391(-) =JcCA0317741(+) =JcCB0164341(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R8U1_RICCO 270 66.4 69.0 (tr|B9R8U1) DNA binding protein, putative OS=Ricinus communis GN=RCOM_1602220 PE=4 SV=1
Arabidopsis_pep AT1G20900.1 171 47.1 54.5 | Symbols: ESC, ORE7, AHL27 | ESC (ESCAROLA); double-stranded DNA binding | chr1:7273024-7273959 FORWARD
soybean_pep Glyma01g34580.1 166 60.1 73.4  
Medicago_pep IMGA|CU179634_7.1 177 67.4 76.8 AGF1 ; transcription facto, putative CU179634.6 27665-28510 H EGN_Mt090430 20090702
grape_pep GSVIVT01027625001 165 58.0 74.1  
castor_bean_cds 30170.m014241 458 84.5 84.5 DNA binding protein, putative
castor_bean_pep 30170.m014241 270 66.4 69.0 DNA binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c10304 60.0 85.9 85.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317741.30 length: 286 aa.
IPR005175 Protein of unknown function DUF296
method AccNumber shortName E-value location
HMMPfam PF03479 DUF296 1.1e-40 92-207
IPR014476 Predicted AT-hook DNA-binding
HMMPIR PIRSF016021 Predicted 6.5e-114 1-257
no_ID  
Seg seg seg NA 49-80
161-170
176-189
237-264