Jatropha Genome Database

JcCA0317481.20 (JcS_100341.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317481
Scaffold:
JcS_100341 JcCB0696091(+) =JcCB0204821(-) =JcCA0317481(-) =JcCB0030711(+) =JcCA0260771(+) =JcCB0333061(+) =JcCB0707071(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl C6T3J2_SOYBN 181 88.0 94.0 (tr|C6T3J2) Putative uncharacterized protein OS=Glycine max PE=4 SV=1
Arabidopsis_pep AT4G26810.2 173 84.0 92.0 | Symbols: | SWIB complex BAF60b domain-containing protein | chr4:13492247-13492649 REVERSE
soybean_pep Glyma08g43410.1 181 88.0 94.0  
Medicago_pep IMGA|Medtr5g025550.1 69.7 39.1 55.4 SWIB/MDM2 chr05_pseudomolecule_IMGAG_V3 10220899-10218990 F EGN_Mt090430 20090702
grape_pep GSVIVT01037716001 177 85.0 93.0  
castor_bean_cds --No_Hits--        
castor_bean_pep 29801.m003069 72.8 50.0 65.2 brg-1 associated factor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317481.20 length: 100 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.245.10 no description 8.3e-14 13-95
HMMPfam PF02201 SWIB 1.8e-23 22-95
superfamily SSF47592 SWIB/MDM2 6.5e-23 11-97
IPR019835 SWIB domain
HMMSmart SM00151 no description 2.4e-12 20-100
no_ID  
HMMPanther PTHR13844 BRG-1 7.5e-05 30-94