Jatropha Genome Database

JcCA0317291.30 (JcS_202044.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317291
Scaffold:
JcS_202044 JcCB0420571(+) =JcCA0317291(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RR88_RICCO 571 78.4 83.7 (tr|B9RR88) Methylthioribose-1-phosphate isomerase, putative OS=Ricinus communis GN=RCOM_0711420 PE=3 SV=1
Arabidopsis_pep AT2G05830.1 501 70.7 79.4 | Symbols: | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | chr2:2229759-2231839 FORWARD
soybean_pep Glyma09g08190.1 315 70.7 81.1  
Medicago_pep IMGA|Medtr2g049600.1 516 73.5 82.5 Initiation factor 2B alpha/beta/delta chr02_pseudomolecule_IMGAG_V3 13600275-13596414 F EGN_Mt090430 20090702
grape_pep GSVIVT01015055001 499 71.9 80.7  
castor_bean_cds 29739.m003741 1051 87.9 87.9 Methylthioribose-1-phosphate isomerase, putative
castor_bean_pep 29739.m003741 571 78.4 83.7 Methylthioribose-1-phosphate isomerase, putative
JAT_13201ests gi|268525961|gb|FM891217.1|FM891217 632 99.1 99.1 FM891217 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001339, mRNA sequence
KJC_r1 KJC_c08531 1098 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317291.30 length: 379 aa.
IPR000649 Initiation factor 2B related
method AccNumber shortName E-value location
Biological Process GO:0044237 cellular metabolic process    
HMMPanther PTHR10233 TRANSLATION 2.2e-175 38-356
HMMPfam PF01008 IF-2B 1.4e-74 59-356
IPR005251 Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase
HMMTigr TIGR00512 salvage_mtnA: 1.5e-208 18-360
IPR011559 Initiation factor 2B alpha/beta/delta
Biological Process GO:0044249 cellular biosynthetic process    
HMMTigr TIGR00524 eIF-2B_rel: 5.7e-94 44-361
no_ID  
Gene3D G3DSA:3.40.50.10470 no description 1.3e-51 154-355
HAMAP MF_01678 MTNA_MF_01678 40.117 17-371
HMMPanther PTHR10233:SF6 TRANSLATION 2.2e-175 38-356
Seg seg seg NA 62-74
123-134
236-246
superfamily SSF100950 NagB/RpiA/CoA 2.3e-107 10-356