Jatropha Genome Database

JcCA0317291.20 (JcS_202044.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317291
Scaffold:
JcS_202044 JcCB0420571(+) =JcCA0317291(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RR87_RICCO 1300 76.1 86.5 (tr|B9RR87) Beta-galactosidase OS=Ricinus communis GN=RCOM_0711410 PE=3 SV=1
Arabidopsis_pep AT5G20710.1 1015 60.1 74.1 | Symbols: BGAL7 | BGAL7 (beta-galactosidase 7); beta-galactosidase | chr5:7010536-7013994 FORWARD
soybean_pep Glyma13g17240.1 1075 63.7 77.2  
Medicago_pep IMGA|Medtr2g049730.1 1098 65.3 78.8 D-galactoside/L-rhamnose binding SUEL lectin; Galactose-binding like chr02_pseudomolecule_IMGAG_V3 13652403-13657884 H EGN_Mt090430 20090702
grape_pep GSVIVT01015038001 1149 67.7 79.1  
castor_bean_cds 29739.m003720 775 82.8 82.8 beta-galactosidase, putative
castor_bean_pep 29739.m003740 1300 76.1 86.5 beta-galactosidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c11977 73.8 90.2 90.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317291.20 length: 827 aa.
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin
method AccNumber shortName E-value location
Molecular Function GO:0005529 sugar binding    
HMMPfam PF02140 Gal_Lectin 1.4e-12 749-827
ProfileScan PS50228 SUEL_LECTIN 12.386 741-827
IPR001944 Glycoside hydrolase, family 35
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00742 GLHYDRLASE35 5.4e-63 22-40
77-96
134-149
213-228
250-265
270-286
621-635
648-664
HMMPanther PTHR23421 BETA-GALACTOSIDASE 1.9e-292 26-827
HMMPfam PF01301 Glyco_hydro_35 7.1e-104 25-301
IPR008979 Galactose-binding domain-like
superfamily SSF49785 Galactose-binding 3.5e-13 610-701
364-567
IPR013781 Glycoside hydrolase, subgroup, catalytic core
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0043169 cation binding    
Gene3D G3DSA:3.20.20.80 no description 1.2e-101 26-308
IPR017853 Glycoside hydrolase, catalytic core
superfamily SSF51445 (Trans)glycosidases 8.7e-81 23-282
IPR019801 Glycoside hydrolase, family 35, conserved site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01182 GLYCOSYL_HYDROL_F35 NA 136-148
no_ID  
HMMPanther PTHR23421:SF2 BETA-GALACTOSIDASE 1.9e-292 26-827