Jatropha Genome Database

JcCA0317221.20 (JcS_200143.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317221
Scaffold:
JcS_200143 JcCA0020601(+) =JcCB0590151(-) =JcCB0212401(+) =JcCA0317221(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SJR9_RICCO 826 76.1 84.7 (tr|B9SJR9) Arginine decarboxylase, putative OS=Ricinus communis GN=RCOM_0907360 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma12g05290.1 724 67.7 80.8  
Medicago_pep IMGA|Medtr4g092740.1 716 66.9 80.6 Lysine decarboxylase; chr04_pseudomolecule_IMGAG_V3 19458427-19462305 E EGN_Mt090430 20090702
grape_pep GSVIVT01026776001 96.3 53.6 77.4  
castor_bean_cds 29843.m000287 920 83.4 83.4 Arginine decarboxylase, putative
castor_bean_pep 29843.m000287 826 76.1 84.7 Arginine decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317221.20 length: 522 aa.
IPR000310 Orn/Lys/Arg decarboxylase, major domain
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF01276 OKR_DC_1 2.9e-67 38-343
PatternScan PS00703 OKR_DC_1 NA 257-271
IPR008286 Orn/Lys/Arg decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.90.100.10 no description 1.3e-12 423-508
HMMPfam PF03711 OKR_DC_1_C 7.3e-10 413-500
superfamily SSF55904 Ornithine 6.1e-29 374-521
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 3.5e-92 38-320
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 6.9e-87 38-416
no_ID  
HMMPanther PTHR10289 L-ALLO-THREONINE 5.8e-05 101-231
Seg seg seg NA 42-54