Jatropha Genome Database

JcCA0317221.10 (JcS_200143.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0317221
Scaffold:
JcS_200143 JcCA0020601(+) =JcCB0590151(-) =JcCB0212401(+) =JcCA0317221(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SJR9_RICCO 632 67.9 76.7 (tr|B9SJR9) Arginine decarboxylase, putative OS=Ricinus communis GN=RCOM_0907360 PE=4 SV=1
Arabidopsis_pep --No_Hits--        
soybean_pep Glyma12g05290.1 553 57.8 71.6  
Medicago_pep IMGA|Medtr4g092760.1 548 58.6 73.8 Lysine decarboxylase; chr04_pseudomolecule_IMGAG_V3 19473940-19476251 E EGN_Mt090430 20090702
grape_pep GSVIVT01026776001 50.4 61.4 72.7  
castor_bean_cds 29843.m000287 646 81.5 81.5 Arginine decarboxylase, putative
castor_bean_pep 29843.m000287 632 67.9 76.7 Arginine decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0317221.10 length: 505 aa.
IPR000310 Orn/Lys/Arg decarboxylase, major domain
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF01276 OKR_DC_1 5.4e-67 80-380
PatternScan PS00703 OKR_DC_1 NA 299-313
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1.2e-90 80-362
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 6.5e-87 80-459
no_ID  
Seg seg seg NA 85-95
331-355