Jatropha Genome Database

JcCA0316311.30 (JcS_103560.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0316311
Scaffold:
JcS_103560 JcCA0316311(-) =JcCB0147481(+) =JcCA0309451(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RHH5_RICCO 561 58.8 68.3 (tr|B9RHH5) Cohesin subunit rad21, putative OS=Ricinus communis GN=RCOM_1526820 PE=4 SV=1
Arabidopsis_pep AT3G59550.1 166 34.6 45.3 | Symbols: SYN3, ATRAD21.2, ATSYN3 | SYN3 | chr3:21997262-22000496 FORWARD
soybean_pep Glyma08g16090.1 58.5 24.8 39.5  
Medicago_pep IMGA|Medtr3g013230.1 110 32.0 46.8 Rad21/Rec8 like protein, C-terminal; Rad21/Rec8 like protein, N-terminal chr03_pseudomolecule_IMGAG_V3 2471651-2467695 E EGN_Mt090430 20090702
grape_pep GSVIVT01032038001 300 43.0 53.7  
castor_bean_cds 30152.m002413 371 88.3 88.3 cohesin subunit rad21, putative
castor_bean_pep 30152.m002413 561 58.8 68.3 cohesin subunit rad21, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0316311.30 length: 709 aa.
IPR006909 Rad21/Rec8 like protein, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0000228 nuclear chromosome    
HMMPfam PF04824 Rad21_Rec8 6e-06 647-674
no_ID  
HMMPanther PTHR12585 SCC1 2e-14 593-673
HMMPanther PTHR12585:SF1 SISTER 2e-14 593-673
Seg seg seg NA 121-140
340-353
467-476
689-701