Jatropha Genome Database

JcCA0316311.20 (JcS_103560.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0316311
Scaffold:
JcS_103560 JcCA0316311(-) =JcCB0147481(+) =JcCA0309451(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SYN7_RICCO 652 88.8 91.9 (tr|B9SYN7) Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0787760 PE=4 SV=1
Arabidopsis_pep AT1G07750.1 561 75.3 85.7 | Symbols: | cupin family protein | chr1:2404300-2405863 REVERSE
soybean_pep Glyma15g04710.1 578 78.4 86.2  
Medicago_pep IMGA|Medtr4g098190.1 576 77.8 86.5 Cupin chr04_pseudomolecule_IMGAG_V3 21085828-21084301 E EGN_Mt090430 20090702
grape_pep GSVIVT01030613001 582 77.8 86.8  
castor_bean_cds 29788.m000326 959 86.2 86.2 nutrient reservoir, putative
castor_bean_pep 29788.m000326 652 88.8 91.9 nutrient reservoir, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0316311.20 length: 358 aa.
IPR006044 11-S plant seed storage protein
method AccNumber shortName E-value location
Molecular Function GO:0045735 nutrient reservoir activity    
FPrintScan PR00439 11SGLOBULIN 1e-14 213-233
260-276
278-293
296-314
318-335
IPR006045 Cupin 1
Molecular Function GO:0045735 nutrient reservoir activity    
HMMPfam PF00190 Cupin_1 8.4e-10 10-136
204-337
HMMSmart SM00835 no description 2.9e-14 5-159
197-341
IPR011051 Cupin, RmlC-type
superfamily SSF51182 RmlC-like 7.1e-38 38-347
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 1.2e-32 12-192
200-357
no_ID  
Seg seg seg NA 77-88
254-270