Jatropha Genome Database

JcCA0316161.30 (JcS_100926.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0316161
Scaffold:
JcS_100926 JcCA0316161(-) =JcCB0819391(+) =JcCD0166585(+) =JcCB0397691(+) =JcCB0148401(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9R8M5_RICCO 348 81.6 90.3 (tr|B9R8M5) AMP dependent ligase, putative OS=Ricinus communis GN=RCOM_1600940 PE=4 SV=1
Arabidopsis_pep AT1G20560.1 268 62.1 77.6 | Symbols: AAE1 | AAE1 (ACYL ACTIVATING ENZYME 1); AMP binding | chr1:7119927-7121730 REVERSE
soybean_pep Glyma11g01710.1 284 65.4 81.2  
Medicago_pep IMGA|Medtr5g008840.1 278 65.5 83.0 AMP-dependent synthetase and ligase chr05_pseudomolecule_IMGAG_V3 1756760-1753660 E EGN_Mt090430 20090702
grape_pep GSVIVT01013358001 280 67.5 80.0  
castor_bean_cds 30170.m014355 436 84.4 84.4 AMP dependent ligase, putative
castor_bean_pep 30170.m014355 348 81.6 90.3 AMP dependent ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06473 886 96.9 96.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0316161.30 length: 268 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 2e-26 40-205
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 186-197
no_ID  
Gene3D G3DSA:3.40.50.980 no description 3.1e-29 10-203
HMMPanther PTHR11968 ATP-DEPENDENT 2.9e-92 2-199
HMMPanther PTHR11968:SF26 ADENOSINE 2.9e-92 2-199
Seg seg seg NA 208-232
238-250
superfamily SSF56801 Acetyl-CoA 5.4e-39 14-205