Jatropha Genome Database

JcCA0315811.20 (JcS_102337.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0315811
Scaffold:
JcS_102337 JcCB0438561(+) =JcCA0315811(+) =JcCA0312321(+) =JcCB0573681(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RIH0_RICCO 1013 69.4 80.7 (tr|B9RIH0) Leucine-rich repeat containing protein, putative OS=Ricinus communis GN=RCOM_1579060 PE=4 SV=1
Arabidopsis_pep AT5G17680.1 495 39.4 59.3 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD
soybean_pep Glyma01g03920.1 518 42.9 61.2  
Medicago_pep IMGA|Medtr8g092830.1 494 40.0 59.6 TIR; NB-ARC chr08_pseudomolecule_IMGAG_V3 20130855-20133880 E EGN_Mt090430 20090702
grape_pep GSVIVT01004877001 530 43.4 63.6  
castor_bean_cds 30169.m006484 1031 83.2 83.2 leucine-rich repeat containing protein, putative
castor_bean_pep 30169.m006484 1013 69.4 80.7 leucine-rich repeat containing protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c12172 54.0 79.9 79.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0315811.20 length: 736 aa.
IPR000157 Toll-Interleukin receptor
method AccNumber shortName E-value location
Molecular Function GO:0004888 transmembrane receptor activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0031224 intrinsic to membrane    
Biological Process GO:0045087 innate immune response    
HMMPfam PF01582 TIR 7.3e-23 22-129
HMMSmart SM00255 no description 8.3e-18 17-145
ProfileScan PS50104 TIR 19.597 16-171
superfamily SSF52200 Toll/Interleukin 2.7e-29 13-155
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 6.9e-25 205-220
281-295
373-387
696-712
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.088 677-698
700-718
IPR002182 NB-ARC
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006915 apoptosis    
HMMPfam PF00931 NB-ARC 4.1e-46 186-441
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1e-04 13-94
Gene3D G3DSA:3.80.10.10 no description 2.2e-10 584-729
HMMPfam PF07725 LRR_3 6e-06 607-626
Seg seg seg NA 689-707
superfamily SSF46785 "Winged 1.3e-16 408-498
superfamily SSF52058 L 9.8e-23 559-720
superfamily SSF52540 P-loop 1.8e-16 156-411