Jatropha Genome Database

JcCA0315721.30 (JcS_100001.80)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0315721
Scaffold:
JcS_100001 JcCB0130751(-) =JcCA0312871(-) =JcCB0287701(+) =JcCB0171671(-) =JcCA0315721(-) =JcCB0186361(+) =JcCA0066941(+) =JcCA0264441(-) =JcPR10F8MCI(+) =JcCA0277701(-) =JcCB0465311(+) =JcCC0332622(+) =JcCB0455701(-) =JcCB0698151(+) =JcCB0545461(+) =JcCA0316711(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T495_RICCO 491 72.3 81.2 (tr|B9T495) ATP binding protein, putative (Fragment) OS=Ricinus communis GN=RCOM_0176040 PE=4 SV=1
Arabidopsis_pep AT3G63110.1 352 57.6 74.0 | Symbols: ATIPT3, IPT3 | ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups | chr3:23318437-23319447 REVERSE
soybean_pep Glyma02g16750.1 329 56.6 76.1  
Medicago_pep IMGA|Medtr1g140830.1 243 46.3 63.1 Isopentenyl transferase-like chr01_pseudomolecule_IMGAG_V3 31270374-31266913 E EGN_Mt090430 20090702
grape_pep GSVIVT01017885001 346 58.1 74.4  
castor_bean_cds 28153.m000272 210 81.9 81.9 ATP binding protein, putative
castor_bean_pep 28153.m000272 491 72.3 81.2 ATP binding protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0315721.30 length: 323 aa.
IPR002627 tRNA isopentenyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0004811 tRNA isopentenyltransferase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0008033 tRNA processing    
HMMPanther PTHR11088 TRNA 4.1e-104 70-297
HMMPfam PF01715 IPPT 5.8e-11 71-146
152-259
no_ID  
HMMPanther PTHR11088:SF20 CYTOKININ 4.1e-104 70-297
Seg seg seg NA 299-313
superfamily SSF52540 P-loop 1.1e-15 32-236