Jatropha Genome Database

JcCA0314171.10 (JcS_110589.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0314171
Scaffold:
JcS_110589 JcCB0534431(+) =JcCA0314171(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SHI8_RICCO 488 45.1 63.9 (tr|B9SHI8) Leucine-rich repeat containing protein, putative OS=Ricinus communis GN=RCOM_1122050 PE=4 SV=1
Arabidopsis_pep AT3G14470.1 304 34.8 52.8 | Symbols: | disease resistance protein (NBS-LRR class), putative | chr3:4857940-4861104 FORWARD
soybean_pep Glyma01g08640.1 364 37.5 56.7  
Medicago_pep IMGA|Medtr3g039910.1 358 37.6 56.5 Disease resistance protein chr03_pseudomolecule_IMGAG_V3 10723657-10728969 H EGN_Mt090430 20090702
grape_pep GSVIVT01013307001 390 40.4 58.0  
castor_bean_cds 30099.m001638 99.6 82.7 82.7 hypothetical protein
castor_bean_pep 29950.m001163 488 45.1 63.9 leucine-rich repeat containing protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0314171.10 length: 1056 aa.
IPR000767 Disease resistance protein
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 9.8e-19 153-168
226-240
324-338
569-585
IPR002182 NB-ARC
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006915 apoptosis    
HMMPfam PF00931 NB-ARC 3.7e-76 130-413
no_ID  
Coil coil coiled-coil NA 3-24
Gene3D G3DSA:3.80.10.10 no description 3.4e-09 493-582
HMMPanther PTHR23155 LEUCINE-RICH 5.5e-06 493-579
Seg seg seg NA 156-163
952-965
superfamily SSF52058 L 2.2e-16 437-582
superfamily SSF52540 P-loop 1e-18 128-347