Jatropha Genome Database

JcCA0313951.20 (JcS_100780.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0313951
Scaffold:
JcS_100780 JcCA0118941(-) =JcCA0154561(-) =JcCB0696171(-) =JcCA0313951(-) =JcCD0149462(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RJC2_RICCO 282 91.0 97.9 (tr|B9RJC2) Vacuolar protein sorting-associated protein VPS9, putative OS=Ricinus communis GN=RCOM_1033030 PE=4 SV=1
Arabidopsis_pep AT3G19770.1 248 77.8 93.1 | Symbols: ATVPS9A, VPS9A | VPS9A; Rho guanyl-nucleotide exchange factor | chr3:6866916-6869114 FORWARD
soybean_pep Glyma06g11340.1 266 86.1 95.8  
Medicago_pep IMGA|Medtr3g010530.1 174 57.5 75.4 Vacuolar sorting protein 9 chr03_pseudomolecule_IMGAG_V3 1862449-1865027 H EGN_Mt090430 20090702
grape_pep GSVIVT01008947001 248 79.3 88.7  
castor_bean_cds 29908.m006221 505 90.5 90.5 Vacuolar protein sorting-associated protein VPS9, putative
castor_bean_pep 29908.m006221 282 91.0 97.9 Vacuolar protein sorting-associated protein VPS9, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0313951.20 length: 169 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR23101 RAB 4.9e-37 1-144
superfamily SSF109993 VPS9 1.1e-16 5-130