Jatropha Genome Database

JcCA0313461.20 (JcS_100240.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0313461
Scaffold:
JcS_100240 JcCA0313461(-) =JcPR10GCESU(+) =JcCA0140901(+) =JcCB0094931(-) =JcCB0693301(+) =JcPR03C8ZD8(+) =JcCB0590851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SKF0_RICCO 137 78.8 90.0 (tr|B9SKF0) Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0658500 PE=4 SV=1
Arabidopsis_pep AT1G28710.1 105 66.2 80.0 | Symbols: | unknown protein | chr1:10086850-10088025 REVERSE
soybean_pep Glyma03g25600.1 116 75.3 87.7  
Medicago_pep IMGA|Medtr1g064780.1 105 70.1 80.5 Uncharacterized protein At4g15970, related chr01_pseudomolecule_IMGAG_V3 12661089-12662984 E EGN_Mt090430 20090702
grape_pep GSVIVT01018317001 111 72.0 81.3  
castor_bean_cds 29709.m001183 133 83.4 83.4 pentatricopeptide repeat-containing protein, putative
castor_bean_pep 29709.m001183 137 78.8 90.0 pentatricopeptide repeat-containing protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0313461.20 length: 80 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR10483 PENTATRICOPEPTIDE 1e-24 19-80
HMMPanther PTHR10483:SF6 REGULATORY 1e-24 19-80