Jatropha Genome Database

JcCA0313461.10 (JcS_100240.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0313461
Scaffold:
JcS_100240 JcCA0313461(-) =JcPR10GCESU(+) =JcCA0140901(+) =JcCB0094931(-) =JcCB0693301(+) =JcPR03C8ZD8(+) =JcCB0590851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SKF1_RICCO 362 96.4 97.4 (tr|B9SKF1) Rac gtpase, putative OS=Ricinus communis GN=RCOM_0658510 PE=3 SV=1
Arabidopsis_pep AT2G44690.1 332 82.9 90.7 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding | chr2:18429276-18430636 FORWARD
soybean_pep Glyma04g02530.1 321 81.3 89.6  
Medicago_pep IMGA|Medtr4g098540.1 324 80.4 88.1 Ras GTPase chr04_pseudomolecule_IMGAG_V3 21246015-21242846 F EGN_Mt090430 20090702
grape_pep GSVIVT01018319001 354 88.1 94.3  
castor_bean_cds 29709.m001184 755 91.3 91.3 rac gtpase, putative
castor_bean_pep 29709.m001184 362 96.4 97.4 rac gtpase, putative
JAT_13201ests gi|268516974|gb|FM892526.1|FM892526 77.8 83.2 83.2 FM892526 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003095, mRNA sequence
KJC_r1 KJC_s15279 77.8 83.2 83.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0313461.10 length: 206 aa.
IPR001806 Ras GTPase
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1e-38 16-37
39-55
56-78
119-132
165-187
IPR003577 Ras small GTPase, Ras type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00173 no description 4.4e-23 13-190
IPR003578 Small GTPase, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 no description 3.4e-113 18-190
ProfileScan PS51420 RHO 25.111 9-187
IPR003579 Ras small GTPase, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 no description 6.3e-30 16-190
IPR005225 Small GTP-binding protein
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 3.5e-31 13-185
IPR013753 Ras
HMMPfam PF00071 Ras 3.1e-53 17-188
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.7e-56 16-195
HMMPanther PTHR11708 RAS-RELATED 4.6e-143 21-206
HMMPanther PTHR11708:SF285RAS-RELATED PROTEIN 4.6e-143 21-206
Seg seg seg NA 2-13
superfamily SSF52540 P-loop 1.6e-54 13-202