Jatropha Genome Database

JcCA0313321.10 (JcS_101939.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0313321
Scaffold:
JcS_101939 JcPR04JFRA4(+) =JcCA0270671(-) =JcCB0017431(-) =JcCA0313321(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9REG7_RICCO 498 61.7 70.6 (tr|B9REG7) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1621120 PE=4 SV=1
Arabidopsis_pep AT1G26610.1 182 34.1 46.1 | Symbols: | zinc finger (C2H2 type) family protein | chr1:9193735-9195102 FORWARD
soybean_pep Glyma02g12840.1 166 37.9 48.5  
Medicago_pep IMGA|Medtr5g046750.1 193 40.1 51.5 Zinc finger, C2H2-type chr05_pseudomolecule_IMGAG_V3 19675613-19674069 E EGN_Mt090430 20090702
grape_pep GSVIVT01011505001 89.0 33.2 45.3  
castor_bean_cds 30174.m009134 478 83.9 83.9 hypothetical protein
castor_bean_pep 30174.m009134 498 61.7 70.6 hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0313321.10 length: 433 aa.
IPR007087 Zinc finger, C2H2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 12-32
97-117
ProfileScan PS50157 ZINC_FINGER_C2H2_2 8.746 10-37
95-122
IPR015880 Zinc finger, C2H2-like
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00355 no description 0.76 10-32
95-117
no_ID  
Coil coil coiled-coil NA 322-343
Seg seg seg NA 34-47
151-158
166-174
331-340
superfamily SSF57667 C2H2 0.011 5-41
94-122