| JcS_102337 | JcCB0438561(+) =JcCA0315811(+) =JcCA0312321(+) =JcCB0573681(+) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9GEZ8_POPTR | 98.6 | 58.1 | 79.1 | (tr|B9GEZ8) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752238 PE=4 SV=1 |
| Arabidopsis_pep | AT4G37860.1 | 67.0 | 51.3 | 69.7 | | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22720.3); Has 543 Blast hits to 488 proteins in 97 species: Archae - 0; Bacteria - 20; Metazoa - 186; Fungi - 63; Plants - 52; Viruses - 1; Other Eukaryotes - 221 (source: NCBI BLink). | chr4:17800589-17801907 REVERSE |
| soybean_pep | --No_Hits-- | ||||
| Medicago_pep | --No_Hits-- | ||||
| grape_pep | --No_Hits-- | ||||
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 30169.m006478 | 75.1 | 51.6 | 85.9 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCA0312321.20 | length: 144 aa. | |||
| IPR013256 | Chromatin SPT2 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF08243 | SPT2 | 9.3e-12 | 42-133 |
| HMMSmart | SM00784 | no description | 1e-11 | 41-133 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 110-131 |