Jatropha Genome Database

JcCA0311331.20 (JcS_104859.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0311331
Scaffold:
JcS_104859 JcCB0452011(+) =JcCA0311331(-) =JcCB0366431(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5AHT5_VITVI 320 81.4 92.3 (tr|A5AHT5) Ubiquitin carrier protein OS=Vitis vinifera GN=VITISV_034608 PE=3 SV=1
Arabidopsis_pep AT4G36800.2 309 78.3 89.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase | chr4:17341237-17342148 REVERSE
soybean_pep Glyma11g06830.3 310 77.0 91.3  
Medicago_pep IMGA|Medtr5g019390.1 303 76.0 89.1 Ubiquitin-conjugating enzyme, E2 chr05_pseudomolecule_IMGAG_V3 7212955-7216762 E EGN_Mt090430 20090702
grape_pep GSVIVT01031919001 320 81.4 92.3  
castor_bean_cds 30170.m013998 250 85.0 85.0 ubiquitin-conjugating enzyme m, putative
castor_bean_pep 29646.m001060 316 79.8 91.8 ubiquitin-conjugating enzyme m, putative
JAT_13201ests gi|237680316|gb|GO246528.1|GO246528 496 92.5 92.5 JcrME_RL0072 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c01634 121 82.0 82.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0311331.20 length: 181 aa.
IPR000608 Ubiquitin-conjugating enzyme, E2
method AccNumber shortName E-value location
Molecular Function GO:0019787 small conjugating protein ligase activity    
Biological Process GO:0043687 post-translational protein modification    
Biological Process GO:0051246 regulation of protein metabolic process    
HMMPfam PF00179 UQ_con 5.2e-38 31-166
HMMSmart SM00212 no description 7.6e-39 30-172
PatternScan PS00183 UBIQUITIN_CONJUGAT_1 NA 99-114
ProfileScan PS50127 UBIQUITIN_CONJUGAT_2 28.454 30-161
IPR015580 RUB1 conjugating enzyme Ubc12
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006464 protein modification process    
Molecular Function GO:0016881 acid-amino acid ligase activity    
HMMPanther PTHR11621:SF17 UBIQUITIN-CONJUGATING 1.3e-100 1-170
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Gene3D G3DSA:3.10.110.10 no description 3.2e-39 30-167
superfamily SSF54495 UBC-like 6e-44 19-173
no_ID  
HMMPanther PTHR11621 UBIQUITIN-CONJUGATING 1.3e-100 1-170