Jatropha Genome Database

JcCA0310901.20 (JcS_101652.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0310901
Scaffold:
JcS_101652 JcCA0230221(+) =JcCA0310901(+) =JcCA0261141(-) =JcCB0284721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T334_RICCO 306 99.3 99.3 (tr|B9T334) Ubiquitin carrier protein OS=Ricinus communis GN=RCOM_0149570 PE=3 SV=1
Arabidopsis_pep AT1G64230.2 302 97.3 99.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme, putative | chr1:23833792-23835220 FORWARD
soybean_pep Glyma11g31410.1 305 98.6 100.0  
Medicago_pep IMGA|Medtr5g083390.1 304 98.6 99.3 Ubiquitin-conjugating enzyme, E2 chr05_pseudomolecule_IMGAG_V3 31655284-31649187 E EGN_Mt090430 20090702
grape_pep GSVIVT01027045001 304 98.6 98.6  
castor_bean_cds 28049.m000299 672 94.1 94.1 ubiquitin-conjugating enzyme E2, putative
castor_bean_pep 28049.m000299 306 99.3 99.3 ubiquitin-conjugating enzyme E2, putative
JAT_13201ests gi|268524610|gb|FM895308.1|FM895308 668 98.9 98.9 FM895308 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002115, mRNA sequence
KJC_r1 KJC_c08090 773 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0310901.20 length: 190 aa.
IPR000608 Ubiquitin-conjugating enzyme, E2
method AccNumber shortName E-value location
Molecular Function GO:0019787 small conjugating protein ligase activity    
Biological Process GO:0043687 post-translational protein modification    
Biological Process GO:0051246 regulation of protein metabolic process    
HMMPfam PF00179 UQ_con 1.7e-52 12-147
HMMSmart SM00212 no description 1.4e-80 11-154
PatternScan PS00183 UBIQUITIN_CONJUGAT_1 NA 81-96
ProfileScan PS50127 UBIQUITIN_CONJUGAT_2 48.995 11-143
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Gene3D G3DSA:3.10.110.10 no description 1.8e-61 6-155
superfamily SSF54495 UBC-like 1.3e-68 9-155
no_ID  
HMMPanther PTHR11621 UBIQUITIN-CONJUGATING 5.3e-110 7-152
HMMPanther PTHR11621:SF29 UBIQUITIN-CONJUGATING 5.3e-110 7-152