Jatropha Genome Database

JcCA0310901.10 (JcS_101652.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0310901
Scaffold:
JcS_101652 JcCA0230221(+) =JcCA0310901(+) =JcCA0261141(-) =JcCB0284721(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RE18_RICCO 282 63.3 75.1 (tr|B9RE18) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1617350 PE=4 SV=1
Arabidopsis_pep AT2G46300.1 180 42.4 63.7 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, sepal, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 340 Blast hits to 339 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 337; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19008392-19009247 FORWARD
soybean_pep Glyma03g41620.1 115 35.9 56.0  
Medicago_pep IMGA|Medtr7g143600.1 143 33.6 54.5 Harpin-induced 1 chr07_pseudomolecule_IMGAG_V3 34496788-34498068 H EGN_Mt090430 20090702
grape_pep GSVIVT01016858001 66.2 28.2 46.2  
castor_bean_cds 30174.m008700 61.9 77.9 77.9 conserved hypothetical protein
castor_bean_pep 30174.m008700 282 63.3 75.1 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0310901.10 length: 244 aa.
IPR004864 Late embryogenesis abundant protein, type 2
method AccNumber shortName E-value location
HMMPfam PF03168 LEA_2 1.8e-06 116-209
no_ID  
Seg seg seg NA 65-78