Jatropha Genome Database

JcCA0309211.10 (JcS_201346.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0309211
Scaffold:
JcS_201346 JcCA0309211(-) =JcCD0182762(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S2X2_RICCO 297 84.7 90.0 (tr|B9S2X2) NAC domain-containing protein, putative OS=Ricinus communis GN=RCOM_0563350 PE=4 SV=1
Arabidopsis_pep AT1G01720.1 234 72.2 81.1 | Symbols: ATAF1, ANAC002 | ATAF1; transcription activator/ transcription factor | chr1:268471-269514 FORWARD
soybean_pep Glyma04g42800.1 264 74.3 79.9  
Medicago_pep IMGA|Medtr3g100760.1 263 76.4 81.6 No apical meristem (NAM) protein chr03_pseudomolecule_IMGAG_V3 24255534-24253159 F EGN_Mt090430 20090702
grape_pep GSVIVT01022354001 228 68.3 77.2  
castor_bean_cds 29648.m002012 333 87.7 87.7 NAC domain-containing protein, putative
castor_bean_pep 29648.m002012 297 84.7 90.0 NAC domain-containing protein, putative
JAT_13201ests gi|268524749|gb|FM895447.1|FM895447 67.9 86.5 86.5 FM895447 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002369, mRNA sequence
KJC_r1 KJC_c00895 999 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0309211.10 length: 167 aa.
IPR003441 No apical meristem (NAM) protein
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0045449 regulation of transcription    
HMMPfam PF02365 NAM 2e-29 5-77
ProfileScan PS51005 NAC 41.220 1-103
superfamily SSF101941 NAC 1.6e-37 1-104
no_ID  
Seg seg seg NA 133-141