Jatropha Genome Database

JcCA0309151.10 (JcS_100067.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0309151
Scaffold:
JcS_100067 JcPR01DT02K(-) =JcPR04GX9UH(+) =JcPR14IO7F0(-) =JcCB0765881(+) =JcCB0588581(-) =JcCA0302101(-) =JcCA0309151(+) =JcCA0293381(-) =JcCB0390961(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RVA8_RICCO 177 59.0 69.2 (tr|B9RVA8) Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Arabidopsis_pep AT3G47110.1 122 44.9 60.5 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:17347103-17350296 REVERSE
soybean_pep Glyma13g34310.1 165 52.6 68.6  
Medicago_pep IMGA|Medtr5g025980.1 162 55.1 67.3 Protein kinase chr05_pseudomolecule_IMGAG_V3 10452968-10449773 E EGN_Mt090430 20090702
grape_pep GSVIVT01020897001 139 50.0 63.6  
castor_bean_cds 30131.m007017 93.7 81.9 81.9 serine-threonine protein kinase, plant-type, putative
castor_bean_pep 29841.m002899 177 59.0 69.2 receptor-kinase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0309151.10 length: 823 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.044 393-414
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.1e-30 326-460
HMMPanther PTHR23258 SERINE-THREONINE 3.3e-52 327-717
HMMPanther PTHR23258:SF474LEUCINE-RICH REPEAT 3.3e-52 327-717
Seg seg seg NA 141-152
411-425
481-503
555-571
superfamily SSF52058 L 2.9e-29 326-453