Jatropha Genome Database

JcCA0309141.10 (JcS_102908.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0309141
Scaffold:
JcS_102908 JcCA0117111(+) =JcCA0309141(+) =JcCB0177611(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HH25_POPTR 159 84.1 86.4 (tr|B9HH25) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819931 PE=3 SV=1
Arabidopsis_pep AT4G35260.1 152 80.7 83.0 | Symbols: IDH1 | IDH1 (ISOCITRATE DEHYDROGENASE 1); isocitrate dehydrogenase (NAD+)/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | chr4:16774494-16776233 REVERSE
soybean_pep Glyma02g04780.1 159 84.1 86.4  
Medicago_pep IMGA|Medtr8g088400.1 158 83.0 86.4 Isocitrate/isopropylmalate dehydrogenase chr08_pseudomolecule_IMGAG_V3 18715358-18720848 F EGN_Mt090430 20090702
grape_pep GSVIVT01003837001 157 83.0 86.4  
castor_bean_cds 29628.m000748 343 91.3 91.3 isocitrate dehydrogenase, putative
castor_bean_pep 29628.m000748 159 84.1 86.4 isocitrate dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05535 603 98.3 98.3  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0309141.10 length: 226 aa.
IPR001804 Isocitrate/isopropylmalate dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD or NADH binding    
Biological Process GO:0055114 oxidation reduction    
Gene3D G3DSA:3.40.718.10 no description 1.9e-28 111-197
HMMPanther PTHR11835 DECARBOXYLATING 6.1e-57 111-197
HMMPfam PF00180 Iso_dh 2.2e-26 108-197
no_ID  
HMMPanther PTHR11835:SF5 ISOCITRATE 6.1e-57 111-197
Seg seg seg NA 24-37
181-192
superfamily SSF53659 Isocitrate/Isopropylmalate 2.3e-30 111-196