Jatropha Genome Database

JcCA0308861.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0308861
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SDL6_RICCO 322 78.4 85.6 (tr|B9SDL6) 50S ribosomal protein L22, putative OS=Ricinus communis GN=RCOM_0422010 PE=3 SV=1
Arabidopsis_pep AT1G52370.3 264 69.4 81.1 | Symbols: | ribosomal protein L22 family protein | chr1:19507052-19508699 FORWARD
soybean_pep Glyma18g46170.1 271 66.3 81.2  
Medicago_pep IMGA|Medtr1g047330.1 254 64.2 76.6 Ribosomal protein L22/L17 chr01_pseudomolecule_IMGAG_V3 11394054-11389061 E EGN_Mt090430 20090702
grape_pep GSVIVT01022501001 300 76.8 84.3  
castor_bean_cds 29333.m001072 597 88.1 88.1 50S ribosomal protein L22, putative
castor_bean_pep 29333.m001072 322 78.4 85.6 50S ribosomal protein L22, putative
JAT_13201ests gi|268520320|gb|FM890168.1|FM890168 644 99.7 99.7 FM890168 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003973, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0308861.10 length: 207 aa.
IPR001063 Ribosomal protein L22/L17
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.90.470.10 no description 1.7e-30 44-156
HMMPfam PF00237 Ribosomal_L22 7.9e-30 48-152
superfamily SSF54843 Ribosomal 2.3e-34 44-153
IPR005727 Ribosomal protein L22, bacterial-type
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015934 large ribosomal subunit    
HMMPanther PTHR13501 CHLOROPLAST 4.2e-57 29-184
HMMTigr TIGR01044 rplV_bact: 2.2e-26 48-150
no_ID  
Seg seg seg NA 147-158