Jatropha Genome Database

JcCA0308071.10 (JcS_107640.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0308071
Scaffold:
JcS_107640 JcCA0308071(-) =JcCA0153521(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RMP1_RICCO 108 66.7 80.8 (tr|B9RMP1) DELLA protein GAI1, putative OS=Ricinus communis GN=RCOM_1082450 PE=4 SV=1
Arabidopsis_pep AT1G63100.1 53.1 36.5 50.0 | Symbols: | scarecrow transcription factor family protein | chr1:23399391-23401367 REVERSE
soybean_pep Glyma17g13680.1 83.6 59.0 67.9  
Medicago_pep IMGA|Medtr8g109760.1 82.0 55.1 70.5 GRAS transcription factor chr08_pseudomolecule_IMGAG_V3 24691711-24693403 E EGN_Mt090430 20090702
grape_pep GSVIVT01010305001 95.5 57.5 73.8  
castor_bean_cds 29929.m004746 321 83.6 83.6 DELLA protein GAI1, putative
castor_bean_pep 29929.m004746 108 66.7 80.8 DELLA protein GAI1, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0308071.10 length: 295 aa.
IPR005202 Transcription factor GRAS
method AccNumber shortName E-value location
HMMPfam PF03514 GRAS 3.2e-13 214-284
ProfileScan PS50985 GRAS 12.215 194-295
no_ID  
Seg seg seg NA 82-95
98-105