Jatropha Genome Database

JcCA0307531.10 (JcS_100108.70)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0307531
Scaffold:
JcS_100108 JcCD0183258(+) =JcCB0453831(-) =JcCB0080951(+) =JcCB0078661(-) =JcCB0336251(-) =JcCA0307531(+) =JcCB0569231(-) =JcPR11GWW51(-) =JcCB0824821(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SEL3_RICCO 511 73.6 85.1 (tr|B9SEL3) Transcription initiation factor ia, putative OS=Ricinus communis GN=RCOM_0970060 PE=4 SV=1
Arabidopsis_pep AT2G34750.1 278 47.1 66.8 | Symbols: | RNA polymerase I specific transcription initiation factor RRN3 family protein | chr2:14660449-14663792 REVERSE
soybean_pep Glyma16g21590.2 354 56.0 74.4  
Medicago_pep IMGA|Medtr4g134310.1 68.2 46.0 60.9 hypothetical protein chr04_pseudomolecule_IMGAG_V3 32378157-32375879 E EGN_Mt090430 20090702
grape_pep GSVIVT01026448001 414 62.4 77.1  
castor_bean_cds 29866.m000624 262 82.9 82.9 transcription initiation factor ia, putative
castor_bean_pep 29866.m000624 511 73.6 85.1 transcription initiation factor ia, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00388 1943 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0307531.10 length: 336 aa.
IPR007991 RNA polymerase I specific transcription initiation factor RRN3
method AccNumber shortName E-value location
HMMPanther PTHR12790 TRANSCRIPTION 2.4e-24 10-336
HMMPfam PF05327 RRN3 3e-58 11-336