Jatropha Genome Database

JcCA0307371.10 (JcS_201341.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0307371
Scaffold:
JcS_201341 JcCA0307371(+) =JcCA0135211(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SB47_RICCO 574 84.4 90.5 (tr|B9SB47) 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative OS=Ricinus communis GN=RCOM_0784670 PE=3 SV=1
Arabidopsis_pep AT2G26930.1 442 76.2 86.9 | Symbols: ATCDPMEK, PDE277, ISPE | ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE); 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | chr2:11491829-11494229 REVERSE
soybean_pep Glyma13g04120.1 476 70.0 80.4  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01037382001 483 71.5 81.4  
castor_bean_cds 29785.m000940 1023 89.5 89.5 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative
castor_bean_pep 29785.m000940 574 84.4 90.5 4-diphosphocytidyl-2-C-methyl-d-erythritol kinase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0307371.10 length: 327 aa.
IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
method AccNumber shortName E-value location
Biological Process GO:0016114 terpenoid biosynthetic process    
Molecular Function GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity    
HAMAP MF_00061 ISPE_MF_00061 21.937 78-325
HMMPanther PTHR20861:SF2 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL 4.9e-66 125-326
HMMTigr TIGR00154 ispE: 4.7e-27 75-327
IPR006204 GHMP kinase
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016301 kinase activity    
Biological Process GO:0016310 phosphorylation    
HMMPfam PF00288 GHMP_kinases_N 4.7e-08 163-209
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 9.7e-39 78-236
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 1.2e-38 76-234
no_ID  
HMMPanther PTHR20861 HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL 4.9e-66 125-326
Seg seg seg NA 171-186
superfamily SSF55060 GHMP 1.6e-10 239-326