Jatropha Genome Database

JcCA0307051.30 (JcS_104661.50)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0307051
Scaffold:
JcS_104661 JcCB0036911(+) =JcCA0307051(+) =JcCB0374601(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B3TM36_ELAGV 297 81.5 84.8 (tr|B3TM36) Ribosomal protein S8 OS=Elaeis guineensis var. tenera PE=2 SV=1
Arabidopsis_pep AT5G59240.1 284 75.7 79.4 | Symbols: | 40S ribosomal protein S8 (RPS8B) | chr5:23902626-23903670 REVERSE
soybean_pep Glyma03g21710.1 296 83.1 84.8  
Medicago_pep IMGA|Medtr8g012680.1 290 80.9 84.3 Ribosomal protein S8E chr08_pseudomolecule_IMGAG_V3 2198871-2196264 F EGN_Mt090430 20090702
grape_pep GSVIVT01031566001 290 81.5 84.3  
castor_bean_cds 29447.m000031 626 86.8 86.8 40S ribosomal protein S8, putative
castor_bean_pep 27613.m000623 291 82.0 84.3 40S ribosomal protein S8, putative
JAT_13201ests gi|268524233|gb|FM894912.1|FM894912 1049 99.8 99.8 FM894912 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000821, mRNA sequence
KJC_r1 KJC_c00404 1191 97.1 97.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0307051.30 length: 243 aa.
IPR001047 Ribosomal protein S8e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMTigr TIGR00307 S8e: 1.2e-42 23-224
no_ID  
HMMPanther PTHR10394 40S 4.6e-126 55-240
HMMPanther PTHR10394:SF1 40S 4.6e-126 55-240
HMMPfam PF01201 Ribosomal_S8e 1.4e-38 34-222
Seg seg seg NA 147-171
232-241