Jatropha Genome Database

JcCA0306971.10 (JcS_101048.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0306971
Scaffold:
JcS_101048 JcCB0134471(+) =JcCA0306971(+) =JcCB0389891(-) =JcCD0061002(-) =JcCB1005201(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IAK0_POPTR 192 93.9 95.9 (tr|B9IAK0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_834953 PE=4 SV=1
Arabidopsis_pep AT5G55160.1 177 92.5 94.6 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag | chr5:22383747-22384772 REVERSE
soybean_pep Glyma08g43290.1 176 89.6 91.7  
Medicago_pep IMGA|AC225519_6.1 104 53.1 69.8 Ubiquitin; Inorganic pyrophosphatase AC225519.5 35386-39197 H EGN_Mt090430 20090702
grape_pep GSVIVT01003307001 180 85.0 90.0  
castor_bean_cds 29762.m000499 139 81.9 81.9 conserved hypothetical protein
castor_bean_pep 29762.m000499 181 93.8 93.8 conserved hypothetical protein
JAT_13201ests gi|268523816|gb|FM890502.1|FM890502 190 84.4 84.4 FM890502 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000172, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0306971.10 length: 102 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
HMMSmart SM00213 no description 9.2e-14 23-94
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 15.971 21-98
no_ID  
Gene3D G3DSA:3.10.20.90 no description 3.1e-32 11-98
HMMPanther PTHR10562 UBIQUITIN-LIKE 4.5e-47 11-102
HMMPfam PF11976 Rad60-SLD 1.7e-25 23-93
superfamily SSF54236 Ubiquitin-like 6.7e-24 19-98