Jatropha Genome Database

JcCA0306791.10 (JcS_109434.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0306791
Scaffold:
JcS_109434 JcCB0296841(-) =JcCA0306791(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9I2E8_POPTR 788 87.8 91.6 (tr|B9I2E8) Auxin efflux carrier component OS=Populus trichocarpa GN=PIN7 PE=4 SV=1
Arabidopsis_pep AT1G73590.1 621 73.1 80.0 | Symbols: PIN1, ATPIN1 | PIN1 (PIN-FORMED 1); transporter | chr1:27659772-27662876 FORWARD
soybean_pep Glyma09g30700.1 760 83.3 90.1  
Medicago_pep IMGA|Medtr6g083450.1 697 78.3 86.1 Auxin Efflux Carrier chr06_pseudomolecule_IMGAG_V3 16997249-16991738 E EGN_Mt090430 20090702
grape_pep GSVIVT01025749001 519 60.4 70.0  
castor_bean_cds 29651.m000296 480 95.6 95.6 hypothetical protein
castor_bean_pep 29816.m000677 521 58.0 71.0 Auxin efflux carrier component, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07557 819 99.1 99.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0306791.10 length: 598 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 3.1e-108 9-254
IPR014024 Auxin efflux carrier, subgroup
HMMTigr TIGR00946 2a69: 5e-174 1-489