Jatropha Genome Database

JcCA0304431.10 (JcS_101275.40)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0304431
Scaffold:
JcS_101275 JcCB0502211(+) =JcCA0143661(+) =JcCA0141501(+) =JcCA0144211(+) =JcCA0304431(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5BMR0_VITVI 263 60.5 75.3 (tr|A5BMR0) Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_041860 PE=4 SV=1
Arabidopsis_pep AT4G23160.1 125 35.8 56.9 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma10g21320.1 195 45.3 68.2  
Medicago_pep IMGA|CU179634_24.1 137 36.5 60.0 Polynucleotidyl transferase, Ribonuclease H fold CU179634.6 87152-89450 H EGN_Mt090430 20090702
grape_pep GSVIVT01000641001 84.7 48.7 73.7  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0304431.10 length: 419 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 2.8e-37 62-193
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 7e-77 66-295
superfamily SSF56672 DNA/RNA 2.4e-07 63-374