Jatropha Genome Database

JcCA0304341.10 (JcS_101452.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0304341
Scaffold:
JcS_101452 JcCD0101367(-) =JcCB0281811(-) =JcCB0283991(+) =JcCA0304341(+) =JcCB0611681(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q9FVD4_MEDVA 535 95.2 97.8 (tr|Q9FVD4) Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform OS=Medicago varia PE=2 SV=1
Arabidopsis_pep AT1G17720.2 517 89.2 96.3 | Symbols: ATB BETA | ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | chr1:6093949-6098065 REVERSE
soybean_pep Glyma15g02640.1 536 95.2 97.4  
Medicago_pep IMGA|Medtr2g121640.1 534 95.2 97.8 WD40-like chr02_pseudomolecule_IMGAG_V3 28903505-28910946 E EGN_Mt090430 20090702
grape_pep GSVIVT01016885001 519 95.5 98.5  
castor_bean_cds 27395.m000083 787 92.6 92.6 protein phosphatase pp2a regulatory subunit B, putative
castor_bean_pep 29794.m003344 504 87.4 94.4 protein phosphatase pp2a regulatory subunit B, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04735 1518 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0304341.10 length: 269 aa.
IPR000009 Protein phosphatase 2A, regulatory subunit PR55
method AccNumber shortName E-value location
Cellular Component GO:0000159 protein phosphatase type 2A complex    
Biological Process GO:0007165 signal transduction    
Molecular Function GO:0008601 protein phosphatase type 2A regulator activity    
FPrintScan PR00600 PP2APR55 1e-101 17-44
45-73
74-101
102-129
130-155
156-182
238-267
HMMPanther PTHR11871 PROTEIN 1.7e-188 1-269
IPR011046 WD40 repeat-like-containing domain
superfamily SSF50978 WD40 1.3e-16 1-268
IPR015943 WD40/YVTN repeat-like-containing domain
Gene3D G3DSA:2.130.10.10 no description 3.3e-09 1-268
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 4-18
IPR019781 WD40 repeat, subgroup
HMMPfam PF00400 WD40 1.6 41-68
99-125