Jatropha Genome Database

JcCA0304251.10 (JcS_104760.40)  /TE
Related links:
Predicted Sequence Links:
Genome Sequence: JcCA0304251
Scaffold:
JcS_104760 JcCB0402071(+) =JcCB0137471(+) =JcCA0304251(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl D5LVE9_9POAL 83.2 56.9 75.9 (tr|D5LVE9) Reverse transcriptase (Fragment) OS=Eleocharis uniglumis PE=4 SV=1
Arabidopsis_pep AT4G23160.1 55.1 49.0 65.3 | Symbols: | protein kinase family protein | chr4:12129485-12134086 FORWARD
soybean_pep Glyma01g29320.1 63.9 57.1 64.3  
Medicago_pep IMGA|Medtr4g080020.1 50.8 41.8 60.0 Polynucleotidyl transferase, Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H EGN_Mt090430 20090702
grape_pep GSVIVT01010555001 57.8 45.5 63.6  
castor_bean_cds --No_Hits--        
castor_bean_pep --No_Hits--        
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCA0304251.10 length: 113 aa.
IPR013103 Reverse transcriptase, RNA-dependent DNA polymerase
method AccNumber shortName E-value location
HMMPfam PF07727 RVT_2 8.6e-17 20-77
no_ID  
HMMPanther PTHR11439 GAG-POL-RELATED 3.1e-15 23-97